{"id":4,"date":"2011-08-08T12:27:19","date_gmt":"2011-08-08T10:27:19","guid":{"rendered":"http:\/\/auditore.cab.inta-csic.es\/stich\/?page_id=4"},"modified":"2017-03-07T12:58:58","modified_gmt":"2017-03-07T10:58:58","slug":"publications","status":"publish","type":"page","link":"http:\/\/auditore.cab.inta-csic.es\/stich\/publications\/","title":{"rendered":"Publications and patents"},"content":{"rendered":"<p><!--:de-->Here, I give a list of peer-reviewed journal publications, book chapters &amp; proceedings, conference talks (since 2010).<\/p>\n<h3><span style=\"text-decoration: underline\">Journal publications (peer-reviewed)<\/span><\/h3>\n<p>[31] C. Blanco, <span style=\"text-decoration: underline\">M. Stich<\/span>, D. Hochberg, &#8220;Mechanically induced homochirality in nucleated enantioselective polymerization&#8221;, J. Phys. Chem. B 121 (2017), 942-955.<\/p>\n<p>[30] <span style=\"text-decoration: underline\">M. Stich<\/span>, J.M. Ribo, D.G. Blackmond, D. Hochberg, &#8220;Necessary conditions for the emergence of homochirality via autocatalytic self-replication&#8221;, J. Chem. Phys. 145 (2016), 074111.<\/p>\n<p>[29] <span style=\"text-decoration: underline\">M. Stich<\/span>, A.C. Chattopadhyay, &#8220;Noise-induced standing waves in oscillatory systems with time-delayed feedback&#8221;, Phys. Rev. E 93 (2016), 052221.<\/p>\n<p>[28] <span style=\"text-decoration: underline\">M. Stich<\/span>, &#8220;Comments on multiple oscillatory solutions in systems with time-delay feedback&#8221;, Electr. J. Diff. Eq. Con. 22 (2015), 99-109.<\/p>\n<p>[27] <span style=\"text-decoration: underline\">M. Stich<\/span>, M.G. Velarde, &#8220;Interaction dynamics in small networks of nonlinear elements&#8221;, Commun. Nonlinear Sci. Numer. Simulat. 20 (2015), 807-818.<\/p>\n<p>[26] F.J. S\u00e1nchez-Luque, <span style=\"text-decoration: underline\">M. Stich<\/span>, S. Manrubia, C. Briones, A. Berzal-Herranz, &#8220;Efficient HIV-1 inhibition by a 16 nt-long RNA aptamer designed by combining in vitro selection and in silico optimisation strategies&#8221;, Nat. Sci. Rep. 4 (2014), 6242.<\/p>\n<p>[25] <span style=\"text-decoration: underline\">M. Stich<\/span>, A. Casal, C. Beta, &#8220;Stabilization of standing waves through time-delay feedback&#8221;, Phys. Rev. E 88 (2013), 042910.<\/p>\n<p>[24] <span style=\"text-decoration: underline\">M. Stich<\/span>, G. Ghoshal, J. P\u00e9rez-Mercader, &#8220;Parametric pattern selection in a reaction-diffusion model&#8221;, PLoS ONE 8 (2013), e77337.<\/p>\n<p>[23] <span style=\"text-decoration: underline\">M. Stich<\/span>, C. Blanco, D. Hochberg, \u201cChiral and chemical oscillations in a simple dimerization model\u201d, Phys. Chem. Chem. Phys. 15 (2013), 255-261.<\/p>\n<p>[22] J. Aguirre, J.M. Buld\u00fa, <span style=\"text-decoration: underline\">M. Stich<\/span>, S.C. Manrubia, \u201cTopological structure of the space of phenotypes: The case of RNA neutral networks\u201d, PLoS ONE 6 (2011), e26324. Download pdf here: <a href=\"http:\/\/auditore.cab.inta-csic.es\/stich\/files\/2011\/08\/aguirrePLoSONE11.pdf\">aguirrePLoSONE11.pdf<\/a><\/p>\n<p>[21] <span style=\"text-decoration: underline\">M. Stich<\/span>, S.C. Manrubia, \u201cMotif frequency and evolutionary search times in RNA populations\u201d, J. Theor. Biol. 280 (2011), 117\u2013126.<\/p>\n<p>[20] C. Blanco, <span style=\"text-decoration: underline\">M. Stich<\/span>, D. Hochberg, \u201cTemporary mirror symmetry breaking and chiral excursions in open and closed systems\u201d, Chem. Phys. Lett. 505 (2011), 140\u2013147.<\/p>\n<p>[19] <span style=\"text-decoration: underline\">M. Stich<\/span>, C. Beta, \u201cControl of pattern formation by time-delay feedback with global and local contributions\u201d, Physica D 239 (2010), 1681\u20131691.<\/p>\n<p>[18] C. Briones, <span style=\"text-decoration: underline\">M. Stich<\/span>, S.C. Manrubia, \u201cA model for the modular evolution of RNA addressing open questions on the origin of life\u201d, Orig. Life Evol. Biosph. 40 (2010), 427\u2013430.<\/p>\n<p>[17] <span style=\"text-decoration: underline\">M. Stich<\/span>, E. L\u00e1zaro, S.C. Manrubia, \u201cVariable mutation rates as an adaptive strategy in replicator populations\u201d, PLoS ONE 5 (2010), e11186. Download pdf here: <a href=\"http:\/\/auditore.cab.inta-csic.es\/stich\/files\/2011\/08\/stichPLoSONE10.pdf\">stichPLoSONE10.pdf<\/a><\/p>\n<p>[16] <span style=\"text-decoration: underline\">M. Stich<\/span>, E. L\u00e1zaro, S.C. Manrubia, \u201cPhenotypic effects of mutations in evolving populations of RNA molecules\u201d, BMC Evol. Biol. 10 (2010), 46. Download pdf here: <a href=\"http:\/\/auditore.cab.inta-csic.es\/stich\/files\/2011\/08\/stichBMCEB10.pdf\">stichBMCEB10.pdf<\/a><\/p>\n<p>[15] <span style=\"text-decoration: underline\">M. Stich<\/span>, S.C. Manrubia, \u201cTopological properties of phylogenetic trees in evolutionary models\u201d, Eur. Phys. J. B 70 (2009), 583\u2013592.<\/p>\n<p>[14] C. Briones, <span style=\"text-decoration: underline\">M. Stich<\/span>, S.C. Manrubia, \u201cThe dawn of the RNA world: Towards functional complexity through ligation of random RNA oligomers\u201d, RNA 15 (2009), 743\u2013749.<\/p>\n<p>[13] <span style=\"text-decoration: underline\">M. Stich<\/span>, A.S. Mikhailov, Y. Kuramoto, \u201cSelf-organized pacemakers and bistability of pulses in an excitable medium\u201d, Phys. Rev. E 79 (2009), 026110.<\/p>\n<p>[12] Ch. Punckt, <span style=\"text-decoration: underline\">M. Stich<\/span>, C. Beta, H.H. Rotermund, \u201cSuppression of spatiotemporal chaos in the oscillatory CO oxidation on Pt(110) by focused laser light\u201d, Phys. Rev. E. 77 (2008), 046222.<\/p>\n<p>[11] <span style=\"text-decoration: underline\">M. Stich<\/span>, C. Briones, S.C. Manrubia, \u201cOn the structural repertoire of pools of short, random RNA sequences\u201d, J. Theor. Biol. 252 (2008), 750\u2013763.<\/p>\n<p>[10] <span style=\"text-decoration: underline\">M. Stich<\/span>, Ch. Punckt, C. Beta, H.H. Rotermund, \u201cControl of spatiotemporal chaos in catalytic CO oxidation by laser-induced pacemakers\u201d, Phil. Transac. R. Soc. A 366 (2008), 416\u2013426.<\/p>\n<p>[9] <span style=\"text-decoration: underline\">M. Stich<\/span>, A.C. Casal, J.I. D\u00edaz, \u201cControl of turbulence in oscillatory reaction-diffusion systems through a combination of global and local feedback\u201d, Phys. Rev. E 76 (2007), 036209.<\/p>\n<p>[8] M.A. Chan, J. Orm\u00f6, A.J. Park, <span style=\"text-decoration: underline\">M. Stich<\/span>, V. Souza-Egipsy, G. Komatsu, \u201cModeling of iron oxide concretion formation: complexities of fluid interactions\u201d, Geofluids 7 (2007), 356\u2013368.<\/p>\n<p>[7] <span style=\"text-decoration: underline\">M. Stich<\/span>, C. Briones, S.C. Manrubia, \u201cCollective properties of evolving molecular quasispecies\u201d, BMC Evol. Biol. 7 (2007), 110. Download pdf here: <a href=\"http:\/\/auditore.cab.inta-csic.es\/stich\/files\/2011\/08\/stichBMCEB07.pdf\">stichBMCEB07.pdf<\/a><\/p>\n<p>[6] A. Casal, J.I. D\u00edaz, <span style=\"text-decoration: underline\">M. Stich<\/span>, \u201cOn some delayed nonlinear parabolic equations modeling CO oxidation\u201d, Dyn. Contin. Discret. Impuls. Syst. A 13 (2006), 413\u2013426 (Supp. S).<\/p>\n<p>[5] <span style=\"text-decoration: underline\">M. Stich<\/span>, A.S. Mikhailov, \u201cTarget patterns in two-dimensional heterogeneous oscillatory reaction-diffusion systems\u201d, Physica D 215 (2006), 38\u201345.<\/p>\n<p>[4] J. Wolff, <span style=\"text-decoration: underline\">M. Stich<\/span>, C. Beta, H.H. Rotermund, \u201cLaser-induced target patterns in the oscillatory CO oxidation on Pt(110)\u201d, J. Phys. Chem. B 108 (2004), 14282\u201314291.<\/p>\n<p>[3] <span style=\"text-decoration: underline\">M. Stich<\/span>, M. Ipsen, A.S. Mikhailov, \u201cSelf-organized pacemakers in birhythmic media\u201d, Physica D 171 (2002), 19\u201340.<\/p>\n<p>[2] <span style=\"text-decoration: underline\">M. Stich<\/span>, A.S. Mikhailov, \u201cComplex pacemakers and wave sinks in heterogeneous oscillatory chemical systems\u201d, Z. Phys. Chem. 216 (2002), 521\u2013534.<\/p>\n<p>[1] <span style=\"text-decoration: underline\">M. Stich<\/span>, M. Ipsen, A.S. Mikhailov, \u201cSelf-organized stable pacemakers near the onset of birhythmicity\u201d, Phys. Rev. Lett. 86 (2001), 4406\u20134409.<\/p>\n<h3><span style=\"text-decoration: underline\">Patents<\/span><\/h3>\n<p>[1] A. Berzal, C. Briones, F. Sanchez-Luque, S.C. Manrubia, <span style=\"text-decoration: underline\">M. Stich<\/span>, &#8220;Mol\u00e9culas inhibidoras del virus de la inmunodeficiencia humana tipo 1 (VIH-1), procedimiento de obtenci\u00f3n y sus aplicaciones&#8221;, submitted patent 23.11.2012.<\/p>\n<h3><span style=\"text-decoration: underline\">Book chapters and proceedings<\/span><\/h3>\n<p>[11] J. Aguirre, <span style=\"text-decoration: underline\">M. Stich<\/span>, \u201cModeling of evolving RNA populations\u201d, in <em>Nonlinear Dynamics in Biological Systems<\/em>, J. Carballido-Landeira, B. Escribano (Eds.), Springer, Switzerland, 2016, pp. 1\u201318.<\/p>\n<p>[10] <span style=\"text-decoration: underline\">M. Stich<\/span>, C. Beta, \u201cStanding waves in a complex Ginzburg-Landau equation with time-delay feedback\u201d, Discret. Cont. Dyn. Syst. S 2 (2011), 1329\u20131334.<\/p>\n<p>[9] A. Casal, J.I. D\u00edaz, <span style=\"text-decoration: underline\">M. Stich<\/span>, J.M. Vegas, \u201cHopf bifurcation and bifurcation from constant oscillations to a torus path for delayed complex Ginzburg-Landau equations\u201d, in <em>Modern Mathematical Tools and Techniques in Capturing Complexity<\/em>, L. Pardo, N. Balakrishnan, M.A. Gil (Eds.), Springer, Berlin, 2011, pp. 57\u201376.<\/p>\n<p>[8] <span style=\"text-decoration: underline\">M. Stich<\/span>, C. Briones, E. L\u00e1zaro, S.C. Manrubia, \u201cPopulations of RNA molecules as computational model for evolution\u201d, in <em>Evolutionary Biology \u2013 Concepts, Molecular and Morphological Evolution<\/em>, P. Pontarotti (Ed.), Springer, Heidelberg, 2010, pp. 67\u201379. Download pdf here: <a href=\"http:\/\/auditore.cab.inta-csic.es\/stich\/files\/2011\/08\/stichBOOKC10.pdf\">stichBOOKC10.pdf<\/a><\/p>\n<p>[7] M. Pavone, <span style=\"text-decoration: underline\">M. Stich<\/span>, B. Streibl, \u201cLocomotion control of a hexapod by Turing patterns\u201d, in <em>Dynamical Systems, Wave-Based Computation and Neuro-Inspired Robots<\/em>, P. Arena (Ed.), Springer, Wien, 2008, pp. 213\u2013219.<\/p>\n<p>[6] <span style=\"text-decoration: underline\">M. Stich<\/span>, Ch. Punckt, C. Beta, H.H. Rotermund, \u201cControl of turbulence in catalytic CO<br \/>\noxidation by heterogeneous pacemakers\u201d, in <em>Experimental Chaos<\/em>, S. Boccaletti et al. (Eds.), INPE, S\u00e3o Jos\u00e9 dos Campos, 2006, pp. 1\u20138.<\/p>\n<p>[5] A. Casal, J.I. D\u00edaz, <span style=\"text-decoration: underline\">M. Stich<\/span>, \u201cEstabilizaci\u00f3n de oscilaciones en la ecuaci\u00f3n compleja de Ginzburg-Landau con feedback retardado\u201d, in <em>Actas XIX CEDYA 2005<\/em>, Univ. Carlos III, Madrid, 2006, EDP-stich_m.pdf.<\/p>\n<p>[4] J. Orm\u00f6, V. Souza-Egipsy, M.A. Chan, A.J. Park, <span style=\"text-decoration: underline\">M. Stich<\/span>, G. Komatsu, \u201cLaboratory experiments to study spherical, iron oxide concretion growth without solid nuclei: implications for understanding meridiani \u201cblueberries\u201d \u201d, 37th Annual Lunar and Planetary Science Conference, March 13-17, 2006, League City (Texas\/USA), abstract no. 1356, 1356.pdf.<\/p>\n<p>[3] <span style=\"text-decoration: underline\">M. Stich<\/span>, A.S.Mikhailov, \u201cHeterogeneous pacemakers in oscillatory media\u201d, in <em>Dynamics and Bifurcation of Patterns in Dissipative Systems<\/em>, G. Dangelmayr and I. Oprea (Eds.), World Scientific Series on Nonlinear Science B 12, World Scientific, Singapore, 2004, pp. 214\u2013228.<\/p>\n<p>[2] <span style=\"text-decoration: underline\">M. Stich<\/span>, C. Beta, J. Wolff, H.H. Rotermund, \u201cInward traveling target patterns in the oscillatory CO oxidation on Pt(110)\u201d, in <em>Experimental Chaos<\/em>, S. Boccaletti et al. (Eds.), AIP Conference Proceedings 752, AIP, Melville, 2004, pp. 9\u201314.<\/p>\n<p>[1] <span style=\"text-decoration: underline\">M. Stich<\/span>, A.S. Mikhailov, \u201cHeterogeneous and self-organized pacemakers in reaction-diffusion systems\u201d, in <em>Modeling of Complex Systems: Seventh Granada Lectures<\/em>, P.L. Garrido and J. Marro (Eds.), AIP Conference Proceedings 661, AIP, Melville, 2003, pp. 273\u2013274.<\/p>\n<h3><span style=\"text-decoration: underline\">Conference talks (2010-2016)<\/span><\/h3>\n<p>[16] &#8220;Replicator dynamics on an RNA fitness landscape under the influence of recombination&#8221;, International Workshop on Genotype-Phenotype Maps, Cambridge (UK), September 2016.<\/p>\n<p>[15] &#8220;Conditions for spontaneous mirror symmetry breaking in cooperative polymerization of chiral species&#8221;, 2nd BCAM Workshop on Nonlinear Dynamics in Biological Systems, Bilbao (Spain), September 2016.<\/p>\n<p>[14] &#8220;Oscillations in simple polymerization models for homochirality&#8221;, Winter Discussion Workshop \u201cBeyond Self-Assembly\u201d, Bad Gastein (Austria), January 2016.<\/p>\n<p>[13] &#8220;Oscillations and symmetry breaking in simple models for homochirality&#8221;, Dynamics Days 2015, Exeter (UK), September 2015.<\/p>\n<p>[12] &#8220;Oscillations in simple polymerization models for homochirality&#8221;, IOP Conference &#8220;Physics of Emergent Behaviour II&#8221;, London (UK), July 2015.<\/p>\n<p>[11] &#8220;Chemical and chiral oscillations in simple polymerization models&#8221;, Engineering of Chemical Complexity 2015, Munich (Germany), June 2015.<\/p>\n<p>[10] &#8220;Stabilization of traveling waves by time-delay feedback in an oscillatory reaction-diffusion system&#8221;, Dynamics Days 2014, Bayreuth (Germany), September 2014.<\/p>\n<p>[9] &#8220;Time-delay feedback control in oscillatory reaction-diffusion systems&#8221;, International Conference &#8220;Building Mathematics and Mutual Understanding&#8221;, Madrid (Spain), July 2014.<\/p>\n<p>[8] &#8220;Evolutionary search processes in networks of RNA genotypes&#8221;, 10th AIMS International Conference on Dynamical Systems, Differential Equations and Applications, Madrid (Spain), July 2014.<\/p>\n<p>[7] &#8220;Control of pattern formation by time-delay feedback with global and local contributions&#8221;, Dynamical Systems and their Application, Bilbao (Spain), December 2013.<\/p>\n<p>[6] &#8220;Search for optimal function in RNA populations evolving over networks of genotypes&#8221;, Dynamics Days 2013, Madrid (Spain), June 2013.<\/p>\n<p>[5] &#8220;Evolutionary search times in RNA populations&#8221;, Nolineal 2012, Zaragoza (Spain), June 2012.<\/p>\n<p>[4] &#8220;Evolutionary search times in RNA populations&#8221;, Astrobiology Science Conference 2012, Atlanta\/Georgia (USA), April 2012.<\/p>\n<p>[3] &#8220;Evolutionary search processes in simple replicator populations&#8221;, European Conference on Complex Systems, Vienna (Austria), September 2011.<\/p>\n<p>[2] &#8220;The emergence of functional complexity in a model of the RNA world&#8221;, Gordon Research Conference &#8220;Oscillations and Dynamic Instabilities in Chemical Systems\u201d, Barga\/Lucca (Italy), July 2010.<\/p>\n<p>[1] &#8220;Stabilization of uniform solutions by distributed time-delay feedback in a reaction-diffusion equation&#8221;, 8th AIMS International Conference on Dynamical Systems, Differential Equations and Applications&#8221;, Dresde (Germany), May 2010.<br \/>\n<!--:--><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Here, I give a list of peer-reviewed journal publications, book chapters &amp; proceedings, conference talks (since 2010). Journal publications (peer-reviewed) [31] C. Blanco, M. Stich, D. Hochberg, &#8220;Mechanically induced homochirality in nucleated enantioselective polymerization&#8221;, J. Phys. Chem. B 121 (2017), &hellip; <a href=\"http:\/\/auditore.cab.inta-csic.es\/stich\/publications\/\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":13,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"open","ping_status":"open","template":"full-width-page.php","meta":{"footnotes":""},"class_list":["post-4","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"http:\/\/auditore.cab.inta-csic.es\/stich\/wp-json\/wp\/v2\/pages\/4","targetHints":{"allow":["GET"]}}],"collection":[{"href":"http:\/\/auditore.cab.inta-csic.es\/stich\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"http:\/\/auditore.cab.inta-csic.es\/stich\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"http:\/\/auditore.cab.inta-csic.es\/stich\/wp-json\/wp\/v2\/users\/13"}],"replies":[{"embeddable":true,"href":"http:\/\/auditore.cab.inta-csic.es\/stich\/wp-json\/wp\/v2\/comments?post=4"}],"version-history":[{"count":91,"href":"http:\/\/auditore.cab.inta-csic.es\/stich\/wp-json\/wp\/v2\/pages\/4\/revisions"}],"predecessor-version":[{"id":212,"href":"http:\/\/auditore.cab.inta-csic.es\/stich\/wp-json\/wp\/v2\/pages\/4\/revisions\/212"}],"wp:attachment":[{"href":"http:\/\/auditore.cab.inta-csic.es\/stich\/wp-json\/wp\/v2\/media?parent=4"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}